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Hey, I am sorry, some of these options are ending up in disparate locations as I add them incrementally. I should go through all this search/tag shit and unify it to the same location.
To change the default file/tag domains for manage tags window autocompletes, hit tags->manage tags display and search, and then select the specific tag service.
That 'default tag service in search pages' governs the tag domain in autocompletes when you open a search page for finding files. It is normally 'all known tags', but you can set it to 'my tags' or something by default. I need to rename and tooltip all this shit, sorry for the trouble.